Python

Config

• https://prefix.dev/ - Pixi

Conda

configenvironment

wget -O Miniforge3.sh "https://mirrors.nju.edu.cn/github-release/conda-forge/miniforge/LatestRelease/Miniforge3-$(uname)-$(uname -m).sh"
bash Miniforge3.sh -b -p "${HOME}/conda"
source "${HOME}/conda/etc/profile.d/conda.sh"
source "${HOME}/conda/etc/profile.d/mamba.sh"
conda activate
conda init && mamba shell init
rm Miniforge3.sh
conda config --set show_channel_urls yes
conda config --set custom_channels.conda-forge https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/
conda config --set custom_channels.bioconda https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/
conda clean -i

conda create -n mkdocs -y mkdocs mkdocs-material -c conda-forge
conda create -n renv -y r-base r-essentials -c conda-forge
conda create -n rpyenv -y \
    python python-lsp-server \
    r-base r-essentials r-languageserver r-tidyverse r-here \
    jupyterlab jupyterlab-lsp jupyterlab-language-pack-zh-CN -c conda-forge
conda create -n sage -y sage -c conda-forge
conda create -n ali -y aliview -c bioconda 

pipx

# conda deactivate
sudo apt install pipx python3-pip
pip config set global.index-url https://mirrors.tuna.tsinghua.edu.cn/pypi/web/simple
pipx install nsz[gui]
pipx ensurepath